ARCvURCplot

ARCvURCplot returns a ggplot object with the ARC vs URC plot to analyze enrichment and library complexity in ChIP-exo data.

ARCvURCplot(..., names.input = NULL, both.strand = FALSE)

Arguments

...

a list of ExoData objects, or several ExoData objects by themselves.

names.input

a character vector with the names to use in the plot. If it is empty ARCvURCplot is going to create the names as the names of the list when they are available or is going to name them as Sample: 1 ,... , Sample: k.

both.strand

A logical value indicating if the DataFrame contains only regions with reads aligned to both strand or all. The default value is FALSE.

Value

A ggplot2 object with the ARC vs URC plot.

Examples

data(exoExample)
ARCvURCplot(exoExample)
#> Warning: Removed 7 rows containing non-finite values (stat_binhex).
#> Warning: Removed 2 rows containing missing values (geom_hex).